Antibiotic Comparison Tool
Omnicef (Cefdinir)
Class: Third-generation cephalosporin
Uses: Acute otitis media, sinusitis, pharyngitis, skin infections
Frequency: Twice daily
Cost: $30-$45 for 10-day course
Side Effects: GI upset, yellow-green stool, rash
Amoxicillin
Class: Penicillin
Uses: Strep throat, otitis media, pneumonia
Frequency: Three times daily
Cost: $8-$15 for 10-day course
Side Effects: Diarrhea, nausea, allergic rash
Azithromycin
Class: Macrolide
Uses: Community-acquired pneumonia, chlamydia, bronchitis
Frequency: Once daily for 3-5 days
Cost: $20-$35 for 10-day course
Side Effects: Abdominal pain, mild QT prolongation
Cefpodoxime
Class: Third-generation cephalosporin
Uses: Sinusitis, bronchitis, uncomplicated skin infections
Frequency: Once daily
Cost: $40-$55 for 10-day course
Side Effects: Diarrhea, rash, headache
Clindamycin
Class: Lincosamide
Uses: Skin abscesses, dental infections, anaerobic pneumonia
Frequency: Four times daily
Cost: $45-$70 for 10-day course
Side Effects: C. difficile colitis, metallic taste, rash
Comparison Results
When treating bacterial infections, Omnicef is a third‑generation oral cephalosporin (generic name cefdinir) that targets a broad range of gram‑positive and gram‑negative bacteria. It’s often prescribed for ear infections, sinusitis, and skin infections, but many patients wonder if another antibiotic might work better, cost less, or have fewer side effects. This guide breaks down how Omnicef stacks up against the most common alternatives, so you can make an informed choice with your doctor.
Quick Take (TL;DR)
- Omnicef is a broad‑spectrum cephalosporin, effective for many pediatric infections but can cause yellow‑green stool.
- Amoxicillin is cheaper and works well for most upper‑respiratory infections unless the bug is resistant.
- Azithromycin offers a short‑course, three‑day regimen, but resistance is rising for common pathogens.
- Cefpodoxime and cefuroxime are newer cephalosporins with similar coverage but higher price points.
- Clindamycin shines for anaerobic infections but carries a higher risk of C. difficile colitis.
What Makes Omnicef (Cefdinir) Unique?
Omnicef belongs to the cephalosporin family, specifically the third generation. Its key attributes are:
- Spectrum: Covers most streptococci, Haemophilus influenzae, Moraxella catarrhalis, and some gram‑negative rods.
- Dosage form: Available as 125mg, 250mg, and 300mg capsules; also a chewable tablet for kids.
- Pharmacokinetics: Peak plasma levels 1-2hours after ingestion; half‑life around 1.7hours, allowing twice‑daily dosing.
- Safety: Generally well tolerated; most common adverse events are mild GI upset and soft, discolored stools.
Because it isn’t broken down by many beta‑lactamases, it remains active where older penicillins fail, yet it still spares the gut flora better than some broader agents.
Common Alternatives to Omnicef
Below are the top five antibiotics that doctors frequently consider as substitutes. Each entry includes a microdata definition for the first mention.
Amoxicillin is a penicillin‑type antibiotic with a narrow‑to‑moderate spectrum, especially effective against Streptococcus pneumoniae and susceptible Haemophilus species.
Azithromycin is a macrolide that concentrates in tissues, allowing a shorter three‑day regimen for many respiratory infections.
Cefpodoxime is a third‑generation oral cephalosporin with a spectrum similar to cefdinir but a longer half‑life, often dosed once daily.
Cefuroxime is a second‑generation cephalosporin used for sinusitis, otitis media, and some skin infections; it offers a slightly broader gram‑positive coverage.
Clindamycin is a lincosamide antibiotic that targets anaerobes and certain gram‑positive organisms, useful for skin and dental infections.
Side‑by‑Side Comparison
Antibiotic | Class | Typical Uses | Dosage Frequency | Common Side Effects | Average Cost (US$) for 10‑day course |
---|---|---|---|---|---|
Omnicef (Cefdinir) | Third‑gen. cephalosporin | Acute otitis media, sinusitis, pharyngitis, skin infections | Twice daily | GI upset, yellow‑green stool, rash | ≈ $30‑$45 |
Amoxicillin | Penicillin | Strep throat, otitis media, pneumonia | Three times daily (or BID for extended‑release) | Diarrhea, nausea, allergic rash | ≈ $8‑$15 |
Azithromycin | Macrolide | Community‑acquired pneumonia, chlamydia, bronchitis | Once daily for 3‑5days | Abdominal pain, mild QT prolongation | ≈ $20‑$35 |
Cefpodoxime | Third‑gen. cephalosporin | Sinusitis, bronchitis, uncomplicated skin infections | Once daily | Diarrhea, rash, headache | ≈ $40‑$55 |
Cefuroxime | Second‑gen. cephalosporin | Sinusitis, otitis media, early‑stage pneumonia | Twice daily | Nausea, dyspepsia, mild liver enzyme rise | ≈ $35‑$50 |
Clindamycin | Lincosamide | Skin abscesses, dental infections, anaerobic pneumonia | Four times daily | C.difficile colitis, metallic taste, rash | ≈ $45‑$70 |

How to Choose the Right Antibiotic
Doctors weigh several factors when swapping one drug for another:
- Pathogen susceptibility: If lab tests show a beta‑lactamase‑producing organism, cefdinir or another third‑gen. cephalosporin often wins over amoxicillin.
- Patient age and weight: Omnicef’s chewable form makes it pediatric‑friendly; clindamycin’s frequent dosing can be hard for kids.
- Allergy history: Penicillin‑allergic patients may need a cephalosporin (if no cross‑reaction) or a macrolide.
- Drug interactions: Azithromycin can boost levels of certain heart medications; clindamycin interferes with neuromuscular blockers.
- Convenience: A once‑daily cefpodoxime dose beats Omnicef’s twice‑daily schedule for patients who struggle with adherence.
- Cost & insurance: Amoxicillin is the most affordable; if insurance covers a brand‑name cephalosporin, the price gap shrinks.
Discuss these points with your prescriber; they’ll match the infection type, local resistance patterns, and your personal health profile.
Safety Profile & Common Side Effects
All antibiotics carry some risk. Here’s what to expect with the six drugs covered:
- Omnicef: Yellow‑green or orange stool is harmless but can alarm patients. Rarely, it triggers a mild rash.
- Amoxicillin: The classic allergic reaction (hives, swelling) is the main concern. Diarrhea occurs in up to 10% of users.
- Azithromycin: Most people tolerate it well; a small percentage experience abdominal cramps or transient QT changes.
- Cefpodoxime & Cefuroxime: Similar GI upset to Omnicef, plus occasional headache.
- Clindamycin: Known for causing C.difficile infection-a serious colitis. Patients should watch for watery, foul‑smelling stool.
If you notice severe rash, breathing difficulty, or persistent diarrhea, contact a healthcare provider promptly.
Cost & Insurance Considerations in 2025
Prescription prices have risen modestly over the past year. Generic cefdinir (Omnicef) typically costs $3‑$4 per 300mg capsule, while brand‑name versions sit near $6 per pill. Most U.S. pharmacy benefit managers place cefdinir in Tier2, meaning a modest co‑pay for insured patients.
Amoxicillin remains the cheapest, often fully covered with a $0‑$5 co‑pay. Azithromycin, especially the extended‑release tablets, sit in Tier2‑3, leading to $10‑$20 out‑of‑pocket. Newer agents like cefpodoxime can be pricier, especially if the brand version is prescribed.
When cost is a big factor, ask your pharmacist about generic swaps or coupon programs. Many chain pharmacies offer a $5‑$10 discount on a 10‑day course of cefdinir.
Real‑World Scenarios
Scenario 1 - Child with acute otitis media: The pediatrician orders Omnicef because the child is allergic to penicillin. The twice‑daily schedule fits the family’s routine, and the chewable formulation ensures the child actually takes the medicine.
Scenario 2 - Adult with community‑acquired pneumonia: Local resistance data shows a high rate of macrolide‑resistant Streptococcus pneumoniae. The physician chooses cefdinir over azithromycin to avoid treatment failure.
Scenario 3 - Patient with a history of C.difficile: Clindamycin is avoided despite its activity against anaerobes; instead, a cephalosporin with a safer gut profile (e.g., cefdinir) is selected.
Key Takeaways
- Omnicef offers broad coverage with a convenient twice‑daily schedule, but its stool discoloration can be unsettling.
- Amoxicillin remains the go‑to for uncomplicated infections where the pathogen is susceptible and the patient isn’t allergic.
- Azithromycin’s short course is attractive, yet rising resistance limits its effectiveness for common respiratory bugs.
- Newer cephalosporins (cefpodoxime, cefuroxime) match Omnicef’s spectrum while offering different dosing schedules and price points.
- Clindamycin is a specialist’s tool for anaerobic infections, used carefully because of C.difficile risk.

Frequently Asked Questions
Can I take Omnicef if I’m allergic to penicillin?
Most people with a true penicillin allergy can safely use cefdinir, as cross‑reactivity is low (<5%). However, you should tell your doctor about the severity of your allergy. If you’ve had an anaphylactic reaction, the clinician may opt for a non‑β‑lactam alternative like azithromycin.
Why does Omnicef turn my stool orange?
The orange or yellow‑green color comes from unabsorbed cefdinir that binds to iron in the gut. It’s harmless and disappears after the course ends. If you’re concerned, try taking the pill with a full glass of water and avoid iron‑rich foods during the treatment.
Is a 5‑day course of Omnicef as effective as a 10‑day course?
Clinical trials show that a 5‑day regimen (300mg twice daily) is non‑inferior for mild to moderate otitis media and sinusitis. For deeper infections like osteomyelitis, a longer 10‑day course is still recommended.
How does the cost of Omnicef compare to generic amoxicillin?
Generic amoxicillin averages $0.30‑$0.50 per 500mg tablet, making a 10‑day course under $5. Generic cefdinir is roughly $1‑$1.50 per 300mg capsule, so a comparable 10‑day course costs $30‑$45. Insurance coverage can narrow this gap, but amoxicillin remains the cheaper option.
When should I pick azithromycin over Omnicef?
Azithromycin shines when a short, once‑daily regimen is needed-such as in travelers who may miss doses, or in patients with gastrointestinal intolerance to cephalosporins. It’s also the drug of choice for atypical pathogens like Mycoplasma pneumoniae.
I think it’s useful to look at the big picture when choosing an antibiotic. Omnicef gives you solid coverage for both gram‑positive and gram‑negative bugs, which is why it’s a common go‑to for kids with ear infections. Compared with amoxicillin, it’s a bit pricier, but the twice‑daily dosing can be easier for families than a three‑times‑daily schedule. On the downside, that yellow‑green stool can scare patients, even though it’s harmless. If cost is a major factor, the cheap generic amoxicillin is still a great first‑line option for susceptible organisms. Bottom line: match the drug to the bug, the patient’s allergy profile, and the wallet.